Core packages

dbverse currently consists of four core libraries that contain classes, generics, and methods for representing and analyzing scientific data objects in a DuckDB database.

1. {dbMatrix} - A library for sparse/dense matrix operations in a database.
2. {dbSpatial} - A library for spatial operations in a database.
3. {dbData} - A library with specifications for base class of dbverse. In progress.
4. {dbSequence} - A library for genomic sequence operations in a database. In progress.

Extensions

R Packages that use dbverse. Want to be added to this list? Please submit an issue or pull request on our Github.

• Giotto
  • A comprehensive spatial transcriptomic analysis toolbox.