Skip to contents

Create S4 spatialNetworkObj

Usage

createSpatNetObj(
  network,
  name = "test",
  networkDT_before_filter = NULL,
  method = NULL,
  spat_unit = "cell",
  provenance = NULL,
  parameters = NULL,
  outputObj = NULL,
  cellShapeObj = NULL,
  crossSectionObjects = NULL,
  misc = NULL
)

Arguments

network

network data with connections, distances, and weightings

name

name of spatialNetworkObj

networkDT_before_filter

(optional) unfiltered data.table of network connections, distances, and weightings

method

method used to generate spatial network

spat_unit

spatial unit tag

provenance

(optional) origin of aggregated information (if applicable)

parameters

(optional) additional method-specific parameters used during spatial network generation

outputObj

(optional) network geometry object

cellShapeObj

(optional) network cell shape information

crossSectionObjects

(optional) crossSectionObjects

misc

misc

Value

spatialNetworkObj

Examples

x <- GiottoData::loadSubObjectMini("spatialNetworkObj")

createSpatNetObj(network = slot(x, "networkDT"), name = "Delaunay_network")
#> An object of class spatialNetworkObj : "Delaunay_network"
#> spat_unit : "cell"
#>    1275 connections (filtered)