Converts a Giotto object to SpatialData object
Usage
giottoToSpatialData(
gobject = NULL,
spat_unit = NULL,
feat_type = NULL,
spot_radius = NULL,
python_path = NULL,
env_name = NULL,
save_directory = NULL
)Arguments
- gobject
giotto object to be converted
- spat_unit
spatial unit which will be used in conversion
- feat_type
feature type which will be used in conversion
- spot_radius
radius of the spots
- python_path
path to python executable within a conda/miniconda environment
- env_name
name of environment containing python_path executable
- save_directory
directory in which the SpatialData object will be saved