![](../logo.png)
convertGiottoLargeImageToMG
convertGiottoLargeImageToMG.Rd
convert a giottoLargeImage by downsampling into a normal magick based giottoImage
Usage
convertGiottoLargeImageToMG(
gobject = NULL,
largeImage_name = NULL,
giottoLargeImage = NULL,
mg_name = NULL,
spat_unit = NULL,
spat_loc_name = NULL,
crop_extent = NULL,
xmax_crop = NULL,
xmin_crop = NULL,
ymax_crop = NULL,
ymin_crop = NULL,
resample_size = 5e+05,
max_intensity = NULL,
return_gobject = TRUE,
verbose = TRUE
)
Arguments
- gobject
gobject containing giottoLargeImage
- largeImage_name
name of giottoLargeImage
- giottoLargeImage
alternative input param using giottoLargeImage object instead of through
gobject
andlargeImage_name
params- mg_name
name to assign converted magick image based giottoImage. Defaults to name of giottoLargeImage
- spat_unit
spatial unit
- spat_loc_name
gobject spatial location name to map giottoImage to (optional)
- crop_extent
extent object to focus on specific region of image
- xmax_crop
assign crop boundary
- xmin_crop
assign crop boundary
- ymax_crop
assign crop boundary
- ymin_crop
assign crop boundary
- resample_size
maximum number of pixels to use when resampling
- max_intensity
value to treat as maximum intensity in color scale
- return_gobject
return as giotto object
- verbose
be verbose