Function to display all instructions from giotto object
Examples
g <- GiottoData::loadGiottoMini("visium")
#> 1. read Giotto object
#> 2. read Giotto feature information
#> 3. read Giotto spatial information
#> 3.1 read Giotto spatial shape information
#> 3.2 read Giotto spatial centroid information
#> 3.3 read Giotto spatial overlap information
#> 4. read Giotto image information
#> python already initialized in this session
#> active environment : 'giotto_env'
#> python version : 3.10
#> checking default envname 'giotto_env'
#> a system default python environment was found
#> Using python path:
#> "/usr/share/miniconda/envs/giotto_env/bin/python"
showGiottoInstructions(g)
#> Warning: `showGiottoInstructions()` was deprecated in GiottoClass 0.3.5.
#> ℹ Please use `instructions()` instead.
#> <giottoInstructions>
#> python_path : /usr/share/miniconda/envs/giotto_env/bin/python
#> show_plot : TRUE
#> return_plot : FALSE
#> save_plot : FALSE
#> save_dir : NA
#> plot_format : png
#> dpi : 300
#> units : in
#> height : 9
#> width : 9
#> is_docker : FALSE
#> active_spat_unit : cell
#> active_feat_type : rna