Show the color instructions that are settable in Giotto. A data.table of the information is invisibly returned
Examples
showColorInstructions()
#>
#> option : 'cell_color_d_pal'
#> default : NULL (distinct colors)
#> description : Cell: color palette to use for discrete color values.
#> Can be supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'poly_color_d_pal'
#> default : NULL (distinct colors)
#> description : Poly: color palette to use for discrete color values.
#> Can be supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'feat_color_pal'
#> default : NULL (distinct colors)
#> description : Feat: color palette to use for discrete color values.
#> Can be supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'heatmap_clus_color_pal'
#> default : NULL (distinct colors)
#> description : Heatmap Clusters: color palette to use for discrete color values.
#> Can be supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'cell_color_d_rev'
#> default : FALSE
#> description : Cell: whether discrete color values should be reversed
#>
#> option : 'poly_color_d_rev'
#> default : FALSE
#> description : Poly: whether discrete color values should be reversed
#>
#> option : 'feat_color_rev'
#> default : FALSE
#> description : Feat: whether discrete color values should be reversed
#>
#> option : 'heatmap_clus_color_rev'
#> default : FALSE
#> description : Heatmap Clusters: whether discrete color values should be reversed
#>
#> option : 'cell_color_d_strategy'
#> default : 'interpolate'
#> description : Cell: 'interpolate', 'recycle', or 'cutoff'. Policy to use when more
#> colors are requested than exist within palette.
#>
#> option : 'poly_color_d_strategy'
#> default : 'interpolate'
#> description : Poly: 'interpolate', 'recycle', or 'cutoff'. Policy to use when more
#> colors are requested than exist within palette.
#>
#> option : 'feat_color_strategy'
#> default : 'interpolate'
#> description : Feat: 'interpolate', 'recycle', or 'cutoff'. Policy to use when more
#> colors are requested than exist within palette.
#>
#> option : 'heatmap_clus_color_strategy'
#> default : 'interpolate'
#> description : Heatmap Clusters: 'interpolate', 'recycle', or 'cutoff'. Policy to
#> use when more colors are requested than exist within palette.
#>
#> option : 'cell_color_c_pal'
#> default : c('blue', 'white', 'red')
#> description : Cell: color palette to use for continuous color values. Can be
#> supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'poly_color_c_pal'
#> default : c('blue', 'white', 'red')
#> description : Poly: color palette to use for continuous color values. Can be
#> supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'cell_color_c_rev'
#> default : FALSE
#> description : Cell: whether continuous color values should be reversed
#>
#> option : 'poly_color_c_rev'
#> default : FALSE
#> description : Poly: whether continuous color values should be reversed
#>
#> option : 'heatmap_color_pal'
#> default : c('blue', 'white', 'red')
#> description : Heatmap: color palette to use for continuous color values.
#> Can be supplied as a the name of a palette accessible by `getColors()`,
#> custom color vector, or an external function with a 'n' colors
#> requested param
#>
#> option : 'heatmap_color_rev'
#> default : FALSE
#> description : Heatmap: whether continuous color values should be reversed