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GiottoVisuals 0.2.3 (2024/05/28)

bug fixes

  • hotfix for sprintf numerics usage %d -> %f

GiottoVisuals 0.2.2 (2024/05/22)

breaking changes

  • option "giotto.color_c_pal" has been split into "giotto.color_cd_pal" and "giotto.color_cs_pal" for divergent and sequential continuous palettes

enhancements

  • some options are now initialized on library load to make them easier to access

GiottoVisuals 0.2.0 (2024/05/13)

changes

  • GiottoClass >= 0.3.0 is now required. (object no longer has @largeImages slot)
  • largeImage_name arg is deprecated. image_name arg should be used instead
  • spatial y dim values are not vertically plotted
  • deprecated spatDimGenePlot3D(), spatGenePlot3D(), dimGenePlot3D in favor of the ‘feat’ naming scheme

bug fixes

  • removed centroid point that unintentionally gets plotted in polygons

enhancements

  • theme_param arg has been added to some plotting functions that provides access to ggplot2::theme() finetuning
  • gg_annotation_raster() now performs plot extent detection and resampling of largeImages
  • resampling args are now globally settable (see ?auto_image_resample)
  • polygon_alpha default is now 1 when plotting polys without images, and 0.5 when plotting with images.

GiottoVisuals 0.1.7 (2024/03/11)

Changes

  • Change default values show_plot = NA, return_plot = NA, save_plot = NA -> show_plot = NULL, return_plot = NULL, save_plot = NULL.
  • Add examples to exported functions
  • Update License

GiottoVisuals 0.1.6 (2024/03/07)

bug fixes

new

  • mixRGB() vectorized additive mixing in RGB space
  • mixHSV() vectorized color mixing in HSV space

GiottoVisuals 0.1.4 (2024/01/25)

bug fixes

  • fix plotting color gradient when using arg point_shape = "no_border"
  • fix image NA value #865 by rbutleriii

new

  • gg_annotation_raster() internal generic for adding a giottoImage, giottoLargeImage, or list thereof to a ggplot object

GiottoVisuals 0.1.2 (2023/01/12)

bug fixes

  • fix ComplexHeatmap saving size issue #861 by rbutleriii

GiottoVisuals 0.1.1 (2023/12/16)

Breaking Changes

Added

Changes

  • Changed: Package internal functions now have . prefix
  • Changed: GiottoUtils and GiottoClass moved to Imports
  • Changed: Other internal function naming changes to bring in line with updates to GiottoUtils

GiottoVisuals 0.1.0 (23/11/29)

Initial release