Description of Giotto saving options,
links to all_plots_save_function
Examples
showSaveParameters()
#> This is a simple guide to help you automatically saving plots.
#> Importantly, defaults for all these parameters can be set at
#> the beginning with createGiottoInstructions()
#> See
#> https://rubd.github.io/Giotto/articles/instructions_and_plotting.html
#> for more information and examples
#>
#> Each plotting function in Giotto has 4 important parameters for
#> showing and/or saving a plot:
#>
#> - show_plot: TRUE or FALSE, show the plot to the console
#> - return_plot: TRUE or FALSE, return the plot to the console
#> (e.g. to further modify or save the plot
#> - save_plot: TRUE or FALSE, automatically save the plot
#> - save_param: a list of parameters that can be set
#> The following list of parameters can be provided to save_param:
#>
#> - save_dir: directory to save the plot to
#> - save_folder: if not NULL, a subfolder within save_dir that will
#> be created to save the plot to
#> - save_name: name of the plot (no extension needed, see save_format)
#> - save_format: picture format to use, default is .png
#> - ncol: number of columns for multiplots
#> - nrow: number of rows for multiplot
#> - scale: scale of plots
#> - base_width: width of plot
#> - base_height: height of plot
#> - base_aspect_ratio: ratio of plot
#> - units: plotting units (e.g. in)
#> - dpi: dpi for each plot if plot is in raster format
#> Example:
#>
#> plotfunction(...,
#> save_plot = TRUE,
#> save_param = list(save_name = 'favorite_name',
#> units = 'png'))