getFeatureMetadata

Get feature metadata from giotto object

Usage

getFeatureMetadata(
  gobject,
  spat_unit = NULL,
  feat_type = NULL,
  output = c("featMetaObj", "data.table"),
  copy_obj = TRUE,
  set_defaults = TRUE
)

Arguments

gobject

giotto object

spat_unit

spatial unit (e.g. "cell")

feat_type

feature type (e.g. "rna", "dna", "protein")

output

return as either 'data.table' or 'featMetaObj'

copy_obj

whether to perform a deepcopy of the data.table information

set_defaults

set default spat_unit and feat_type. Change to FALSE only when expression and spat_info are not expected to exist.

See also

fDataDT