Get giotto polygon spatVector
Usage
get_polygon_info(
gobject,
polygon_name = NULL,
polygon_overlap = NULL,
return_giottoPolygon = FALSE,
verbose = TRUE,
simplify = TRUE
)
Arguments
- gobject
giotto object
- polygon_name
name of polygons. Default "cell"
- polygon_overlap
if not NULL, return specified polygon overlap information
- return_giottoPolygon
(Defaults to FALSE) Return as giottoPolygon S4 object
- verbose
be verbose
- simplify
logical. Whether or not to take object out of a list when there is a length of 1.
See also
Other polygon info data accessor functions:
getPolygonInfo()
,
setPolygonInfo()
,
set_polygon_info()
Other functions to get data from giotto object:
getDimReduction()
,
getExpression()
,
getFeatureInfo()
,
getGiottoImage()
,
getMultiomics()
,
getNearestNetwork()
,
getPolygonInfo()
,
getSpatialEnrichment()
,
getSpatialGrid()
,
getSpatialLocations()
,
getSpatialNetwork()
,
get_NearestNetwork()
,
get_dimReduction()
,
get_feature_info()
,
get_giottoImage()
,
get_multiomics()
,
get_spatialGrid()
,
get_spatialNetwork()
,
get_spatial_enrichment()
,
get_spatial_locations()