Function to get spatial grid
Usage
get_spatialGrid(
gobject,
spat_unit = NULL,
feat_type = NULL,
name = NULL,
return_grid_Obj = FALSE,
set_defaults = TRUE
)Arguments
- gobject
giotto object
- spat_unit
spatial unit (e.g. "cell")
- feat_type
feature type (e.g. "rna", "dna", "protein")
- name
name of spatial grid
- return_grid_Obj
return grid object (default = FALSE)
- set_defaults
set default spat_unit and feat_type. Change to FALSE only when expression and spat_info are not expected to exist.
See also
Other spatial grid data accessor functions:
getSpatialGrid(),
setSpatialGrid(),
set_spatialGrid()
Other functions to get data from giotto object:
getDimReduction(),
getExpression(),
getFeatureInfo(),
getGiottoImage(),
getMultiomics(),
getNearestNetwork(),
getPolygonInfo(),
getSpatialEnrichment(),
getSpatialGrid(),
getSpatialLocations(),
getSpatialNetwork(),
get_NearestNetwork(),
get_dimReduction(),
get_feature_info(),
get_giottoImage(),
get_multiomics(),
get_polygon_info(),
get_spatialNetwork(),
get_spatial_enrichment(),
get_spatial_locations()