Package index
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deprecate_param() - Deprecate a parameter
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dir_manifest() - Generate file manifest list from a directory
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dt_dcast_string() - dt_dcast_string
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dt_remove_na() - dt_remove_na
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dt_set_row_order() - Set specific data.table row order
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dt_sort_combine_two_columns() - dt_sort_combine_two_columns
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dt_to_matrix() - dt_to_matrix
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file_extension() - Get file extension
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getDistinctColors() - getDistinctColors
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getMonochromeColors() - Create color scaling for a single color starting from black
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getRainbowColors() - getRainbowColors
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giottoNewLog() - Create a new Giotto log
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giottoReadLog() - Read from the last generated log file
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giotto_bpparam() - Giotto Default BiocParallel Param
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gstop() - Module-specific error message
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handle_warnings() - Warning handling
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init_option() - Initialize an option
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lifecycle_badge() - lifecycle badge
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local_seed() - Set a seed local to a call
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log_write() - Write to log file
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melt_matrix() - Melt a matrix
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new_github_ver_avail() - Check if a package has newer github version
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pbar() - Create a progressr progress tracker.
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get_prev_call()get_prev_fname()get_args()get_args_list() - Previous calls
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print_list() - Pretty print formatting for lists and vectors
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py_active_env() - Active python environment
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random_seed() - Set a random seed
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require_depth() - Coerce to AT LEAST specified nesting depth
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to_scipy_sparse()from_scipy_sparse() - Convert between Matrix and scipy sparse representations
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str_vector()str_bracket()str_parenth()str_double_quote()str_quote() - String convenience functions
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str_locate2() - Find location of match in string
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suite_install()experimental - Giotto Suite GitHub Installation
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suite_packages() - Giotto Suite Packages
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time_format() - Format time for printing
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vmsg() - Verbose message handler
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gwith_options()gwith_package()gwith_seed() - With utilities
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with_pbar() - Track progress while evaluating an R expression
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wrap_msg() - Wrap message
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wrap_txt()wrap_txtf() - Wrap text