Set cell metadata
setCellMetadata.Rd
Function to set cell metadata into giotto object
Usage
setCellMetadata(
gobject,
x,
spat_unit = NULL,
feat_type = NULL,
provenance = NULL,
verbose = TRUE,
initialize = TRUE
)
Arguments
- gobject
giotto object
- x
cellMetaObj or list of cellMetaObj to set. Passing NULL will reset a specified set of cell metadata in the giotto object.
- spat_unit
spatial unit (e.g. "cell")
- feat_type
feature type (e.g. "rna", "dna", "protein")
- provenance
provenance information (optional)
- verbose
be verbose
- initialize
(default = FALSE) whether to initialize the gobject before returning
See also
Other functions to set data in giotto object:
get_cell_id()
,
get_feat_id()
,
setDimReduction()
,
setExpression()
,
setFeatureInfo()
,
setFeatureMetadata()
,
setGiottoImage()
,
setMultiomics()
,
setNearestNetwork()
,
setPolygonInfo()
,
setSpatialEnrichment()
,
setSpatialGrid()
,
setSpatialLocations()
,
setSpatialNetwork()
,
set_NearestNetwork()
,
set_cell_id()
,
set_cell_metadata()
,
set_dimReduction()
,
set_expression_values()
,
set_feat_id()
,
set_feature_info()
,
set_feature_metadata()
,
set_giottoImage()
,
set_multiomics()
,
set_polygon_info()
,
set_spatialGrid()
,
set_spatialNetwork()
,
set_spatial_enrichment()
,
set_spatial_locations()