Set giotto image object
setGiottoImage.Rd
Directly attach a giotto image to giotto object
Usage
setGiottoImage(
gobject = NULL,
image = NULL,
image_type = NULL,
name = NULL,
verbose = TRUE
)
Arguments
- gobject
giotto object
- image
giotto image object to be attached without modification to the giotto object
- image_type
type of giotto image object. Either "image" or "largeImage"
- name
name of giotto image object
- verbose
be verbose
Details
Use with care! This function directly attaches giotto image
objects to the gobject without further modifications of spatial positioning values
within the image object that are generally needed in order for them to
plot in the correct location relative to the other modalities of spatial data.
For the more general-purpose method of attaching image objects, see addGiottoImage
See also
Other image data accessor functions:
getGiottoImage()
,
get_giottoImage()
,
set_giottoImage()
Other functions to set data in giotto object:
get_cell_id()
,
get_feat_id()
,
setCellMetadata()
,
setDimReduction()
,
setExpression()
,
setFeatureInfo()
,
setFeatureMetadata()
,
setMultiomics()
,
setNearestNetwork()
,
setPolygonInfo()
,
setSpatialEnrichment()
,
setSpatialGrid()
,
setSpatialLocations()
,
setSpatialNetwork()
,
set_NearestNetwork()
,
set_cell_id()
,
set_cell_metadata()
,
set_dimReduction()
,
set_expression_values()
,
set_feat_id()
,
set_feature_info()
,
set_feature_metadata()
,
set_giottoImage()
,
set_multiomics()
,
set_polygon_info()
,
set_spatialGrid()
,
set_spatialNetwork()
,
set_spatial_enrichment()
,
set_spatial_locations()