registerGiottoObjectListRvision

Function to spatially align gobject data based on Rvision image registration.

registerGiottoObjectListRvision(
  gobject_list = gobject_list,
  image_list = NULL,
  save_dir = NULL,
  spatloc_unreg = NULL,
  spatloc_reg_name = "raw",
  verbose = TRUE
)

Arguments

gobject_list

list of gobjects to register

image_list

Filepaths to unregistered images

save_dir

(Optional) If given, save registered images to this directory

spatloc_unreg

spatial locations to use

spatloc_reg_name

name for registered spatial locations to. Defaults to replacement of spat_unreg (optional)

verbose

be verbose

Value

list of registered giotto objects where the registered images and spatial locations