create_screeplot

Source: R/dimension_reduction.R

create screeplot with ggplot

create_screeplot(eigs, ncp = 20, ylim = c(0, 20))

Arguments

eigs

numeric. Vector of pca eigenvalues

ncp

numeric. max number of principal components to plot

ylim

numeric. y-axis limits on scree plot

Value

ggplot

Examples

dr <- GiottoData::loadSubObjectMini("dimObj")
scree <- create_screeplot(methods::slot(dr, "misc")$eigenvalues)
scree