load_niche_cluster_nt_score — load_niche_cluster_nt

load niche cluster NT score

load_niche_cluster_nt_score(
  gobject,
  ontrac_results_dir = getwd(),
  NTScore_dir = file.path(ontrac_results_dir, "NTScore_dir"),
  NTScore_reverse = FALSE
)

Arguments

gobject: giotto object
ontrac_results_dir: the directory where the ONTraC results are saved. Default is getwd()
NTScore_dir: the directory to save the NTScore results. Default is file.path(ontrac_results_dir, "NTScore_dir")
NTScore_reverse: whether to reverse the NTScore. Default is FALSE

Value

gobject with niche cluster NT score

Details

This function loads the ONTraC outputed niche cluster NT score into the giotto object.