showCellProportionSwitchedSanKey

showCellProportionSwitchedSanKey

showCellProportionSwitchedSanKey(
  gobject = NULL,
  spat_unit = NULL,
  alt_spat_unit = NULL,
  feat_type = NULL
)

Arguments

gobject

giotto object which contains metadata for both spat_unit and alt_spat_unit

spat_unit

spatial unit

alt_spat_unit

alternative spatial unit which stores data after resizing annotations

feat_type

feature type

Value

D3 JavaScript Sankey diagram

Details

Creates a Sankey Diagram to illustrate cluster switching behavior. Currently only supports displaying cluster switching for kmeans clusters.