plotCellTypeNTScore

plot NTScore by cell type

plotCellTypeNTScore(
  gobject,
  cell_type,
  values = "NTScore",
  spat_unit = "cell",
  feat_type = "niche cluster",
  show_plot = NULL,
  return_plot = NULL,
  save_plot = NULL,
  save_param = list(),
  default_save_name = "CellTypeNTScore"
)

Arguments

gobject

giotto object

cell_type

the cell type column name in the metadata

spat_unit

spatial unit (e.g. "cell")

feat_type

feature type (e.g. "rna", "dna", "protein")

show_plot

logical. show plot

return_plot

logical. return ggplot object

save_plot

logical. save the plot

save_param

list of saving parameters, see showSaveParameters

default_save_name

default save name for saving, don't change, change save_name in save_param

Value

ggplot